Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (425), Expect = 1e-46
 Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 3/235 (1%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           M     + +++DD +LR +L  Y++ QGFQV + A GE     +      L++LDLMLPG
Sbjct: 1   MVENHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPG 60

Query: 61  ENGLTICRQIR-AQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLM 119
           E+GL+ICR++R +  +  ILMLTA  D+ D +  LE+GADD++ KP  PR LLARI+ ++
Sbjct: 61  EDGLSICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVL 120

Query: 120 RRE--ERTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVV 177
           RR+  E   A +    +++FG   LN   R      E + L+  EF +L  L + A + +
Sbjct: 121 RRQVIEAPGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPL 180

Query: 178 SREFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPD 232
           SR+ L    RG EY  ++R++D +I  LR+ L  D S P+ I TV G GY+FVPD
Sbjct: 181 SRDKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPD 235