Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Two-component transcriptional response regulator, OmpR family from Sphingobium sp. HT1-2

 Score =  154 bits (390), Expect = 1e-42
 Identities = 92/227 (40%), Positives = 133/227 (58%), Gaps = 4/227 (1%)

Query: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
           I+EDD  +R+++   +T +GF+V       +     +L + D ++LDLMLPGE+GL IC+
Sbjct: 35  IVEDDPGIRDLVRMLLTREGFEVLAMENSASLDVDGVLERLDCLILDLMLPGEDGLEICQ 94

Query: 69  QIRAQFLG-KILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREER--T 125
           ++RA++    IL++TA DD  D +  LE+GADD++ KP   R LLAR+R ++RR     T
Sbjct: 95  RLRARWPRLPILIVTAKDDPIDRIIGLEIGADDYLAKPFNKRELLARLRSIIRRTRDIDT 154

Query: 126 SASADATHLLQFGGLLLNQSRRHCELD-GEVINLSDSEFDLLWLLASAADQVVSREFLTK 184
           +AS +     +F G LL    R      GE + L+ SEFDLL  L     +++SRE L  
Sbjct: 155 AASEENGDNFRFDGWLLRLGARDLTNPAGEPVGLTTSEFDLLHALVMHPRRILSRELLID 214

Query: 185 SLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVP 231
             RG     +DR +D ++  LR+KL DD   P  I TVRG GYLF P
Sbjct: 215 WTRGGHASPVDRVIDVQMSRLRRKLGDDPREPAMIRTVRGDGYLFAP 261