Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA-binding response regulator GltR, controls specific porins for the entry of glucose from Sphingobium sp. HT1-2

 Score =  167 bits (422), Expect = 2e-46
 Identities = 92/231 (39%), Positives = 141/231 (61%), Gaps = 5/231 (2%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           MS +P L +++D+  +RE LA+Y++  GF+VT       A  ++  N  DLV+LD+M+PG
Sbjct: 1   MSERPHLLLVDDERSIREPLAQYLSRNGFRVTAVENAAEARLRLAANAIDLVILDIMMPG 60

Query: 61  ENGLTICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR 120
           E+GL++CR IR      +++LTA  ++ D +  LEMGADD+V KP  PR L+ARI+++ R
Sbjct: 61  EDGLSLCRHIRETSEIPVILLTARSEETDRIVGLEMGADDYVLKPFSPRELVARIKVIFR 120

Query: 121 R----EERTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQV 176
           R     +R +A   AT+    G LL  Q R   + +G  + LS +E++L+   A+  +QV
Sbjct: 121 RVATGGQRVTAPDGATYAFA-GWLLKTQERTLVDAEGVSLPLSTAEYNLMLAFATRPNQV 179

Query: 177 VSREFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGY 227
           +SR+ L    +G E +  DR +DN+I  LRKK+  D+  P  I TV G GY
Sbjct: 180 LSRDQLLDITQGREANAFDRAIDNQISRLRKKIEPDAKNPTLIKTVWGGGY 230