Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 2e-62
 Identities = 112/226 (49%), Positives = 157/226 (69%), Gaps = 3/226 (1%)

Query: 5   PSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGL 64
           P + I+EDD +L E+ AEY+   GF+V   A G  A  +I+ +QPDLV+LDLMLPGE+GL
Sbjct: 6   PRILIVEDDQRLAELTAEYLQANGFEVAVEADGARAARRIIDSQPDLVILDLMLPGEDGL 65

Query: 65  TICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREER 124
           +ICR++R+Q+ G ILMLTA  D+ D V  L++GADD+V KP++PR+LLARI+ L+RR E 
Sbjct: 66  SICRRVRSQYQGPILMLTARSDELDQVQGLDLGADDYVCKPVRPRLLLARIQALLRRSET 125

Query: 125 TSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTK 184
             +       L FG L ++   R   L  ++I L+ +EFDLLWLLAS A +V++RE +  
Sbjct: 126 VDSKRQD---LAFGALRIDNRLREARLGEQLIELTGAEFDLLWLLASNAGRVLTREQIFT 182

Query: 185 SLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFV 230
           +LRG+ YDG DR++D +I  +R K+ DD   P+ I T+R KGYLFV
Sbjct: 183 ALRGVGYDGQDRSIDIRISKIRPKIGDDPLQPRLIKTLRSKGYLFV 228