Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 2e-41
 Identities = 92/227 (40%), Positives = 131/227 (57%), Gaps = 5/227 (2%)

Query: 6   SLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLT 65
           S+ +++DD ++RE+L  Y++  GFQV   A G+     +     DLV+LD+MLP E+G +
Sbjct: 7   SILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFS 66

Query: 66  ICRQIR---AQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRRE 122
           +CR +R    Q    I+MLTAS D+ D V  LE+GADD++ KP  PR L ARI+ L+RR 
Sbjct: 67  LCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRT 126

Query: 123 ERTSASADATHLLQFGGLLLNQ-SRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREF 181
           E    +A    +L F    L+  S R    DGE + LS ++F LL L      Q++ R+ 
Sbjct: 127 E-FGQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRDT 185

Query: 182 LTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYL 228
           +  + RG E   LDR VD  +  LR++L D    P+ I TVRG GYL
Sbjct: 186 IGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYL 232