Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  153 bits (387), Expect = 2e-42
 Identities = 86/226 (38%), Positives = 142/226 (62%), Gaps = 3/226 (1%)

Query: 6   SLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLT 65
           +L +++DD ++RE+L +Y+T+ G+ V   A G+   +Q+  ++ +LV+LDLMLPGE+GL+
Sbjct: 4   TLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLS 63

Query: 66  ICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREER- 124
           +CRQ++A     ++ML+A     D +  LE+GADD++ KP +PR L+ARI+ ++RR +R 
Sbjct: 64  LCRQLQATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRL 123

Query: 125 -TSASADATHLLQFGGLLLNQSRR-HCELDGEVINLSDSEFDLLWLLASAADQVVSREFL 182
            TSA         F G  L   +R     DGE + L  S++ +L  L  A ++VVSR+ L
Sbjct: 124 GTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRDQL 183

Query: 183 TKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYL 228
           T+S  G ++   DR+VD  +  LR++L    +   +I+T+R +GYL
Sbjct: 184 TRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYL 229