Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., Transcriptional regulatory protein RstA from Pseudomonas sp. DMC3

 Score =  200 bits (509), Expect = 2e-56
 Identities = 105/226 (46%), Positives = 150/226 (66%), Gaps = 3/226 (1%)

Query: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
           ++EDD +L  ++A ++   G++V T   G+ A    L  +P +++LDLMLPG++GL +CR
Sbjct: 19  LVEDDERLAALIAHFLEQHGYEVRTVHRGDLAMAAFLEFKPKVLVLDLMLPGQSGLQVCR 78

Query: 69  QIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERTSAS 128
           +IR+     I++LTA +DD DH+  LE GADD+V KPIKP VLLAR+R L RR+   +  
Sbjct: 79  EIRSVSDTPIVILTAKEDDLDHILGLESGADDYVIKPIKPPVLLARLRALQRRQ---TPD 135

Query: 129 ADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTKSLRG 188
           +     L+FG L +++S R   L GE+I L+  EF+LLWLLASAA +++SR+ +   +RG
Sbjct: 136 SSVVSFLEFGQLNIDRSCREVRLTGELIELTTMEFELLWLLASAAGKILSRDDILNRMRG 195

Query: 189 IEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPDTW 234
           I +DGL+R+VD  I  LR KL D+   P  I TV GKGYLF P  W
Sbjct: 196 IAFDGLNRSVDVYISKLRNKLKDNPREPVCIKTVWGKGYLFNPFAW 241