Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., Two-component system response regulator OmpR from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  160 bits (404), Expect = 3e-44
 Identities = 86/228 (37%), Positives = 139/228 (60%), Gaps = 4/228 (1%)

Query: 9   IIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTICR 68
           +++DD ++R++L  Y+  +GF+V     G+     +  +  DL++LDLM+PGE+GL+ICR
Sbjct: 13  VVDDDVRIRDLLRRYLMQEGFEVMLAEDGKALNRVLQRDSVDLIVLDLMMPGEDGLSICR 72

Query: 69  QIRAQF-LGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERTS- 126
           ++RA      I+MLTA  +D D +  LE+GADD++ KP  PR LLARI  ++RR   T  
Sbjct: 73  RLRANGDRTPIIMLTAKSEDVDRIVGLEVGADDYLGKPFNPRELLARIHAVLRRRPPTEV 132

Query: 127 --ASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLTK 184
             A +    +++FG    + S R    +G  + L+  EF +L  L     Q +SRE L +
Sbjct: 133 PGAPSQDQEVVKFGPFEFDLSLRTLRKEGADLPLTTGEFAMLKALVRHPRQPLSREKLAQ 192

Query: 185 SLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPD 232
             RG E++  DR++D ++  LRK + +D+++P+ + TV G GY+FVPD
Sbjct: 193 LARGREFEPFDRSLDVQVSRLRKLIEEDAASPRYLQTVWGVGYVFVPD 240