Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., two-component system response regulator RstA from Escherichia coli ECRC101

 Score =  206 bits (523), Expect = 4e-58
 Identities = 107/236 (45%), Positives = 152/236 (64%), Gaps = 7/236 (2%)

Query: 6   SLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLT 65
           ++  +EDD ++  ++A Y+     QVT    G+ A E IL   PDLVLLD+MLPG++G+T
Sbjct: 3   TIVFVEDDAEVGSLIAAYLAKHDIQVTVEPRGDQAEETILRENPDLVLLDIMLPGKDGMT 62

Query: 66  ICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERT 125
           ICR +RA++ G I++LT+ D D +H+ ALEMGA D++ K   P VLLAR+R+ +R+ E+ 
Sbjct: 63  ICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQA 122

Query: 126 S-------ASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVS 178
           +        S      L FG L ++   R   L    I+LS ++F+LLW LA+ A Q++ 
Sbjct: 123 TLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQIMD 182

Query: 179 REFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPDTW 234
           R+ L K+LRG+ YDGLDR+VD  I  LRKKL D+++ P RI TVR KGYLF P  W
Sbjct: 183 RDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAW 238