Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., two-component system response regulator OmpR from Dickeya dianthicola ME23

 Score =  166 bits (421), Expect = 3e-46
 Identities = 93/235 (39%), Positives = 140/235 (59%), Gaps = 3/235 (1%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           M     + +++DD +LR +L  Y+T QGFQV + A  E     +      L++LDLMLPG
Sbjct: 1   MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG 60

Query: 61  ENGLTICRQIRAQFLG-KILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLM 119
           E+GL+ICR++R+Q     I+M+TA  ++ D +  LE+GADD++ KP  PR LLARIR ++
Sbjct: 61  EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL 120

Query: 120 RRE--ERTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVV 177
           RR+  E   A +    ++ FG   LN   R    D E + L+  EF +L  L S   + +
Sbjct: 121 RRQANELPGAPSQEEAIIAFGKFKLNLGTREMFRDDEPMPLTSGEFAVLKALVSHPREPL 180

Query: 178 SREFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPD 232
           SR+ L    RG EY  ++R++D +I  LR+ + +D + P+ I TV G GY+FVPD
Sbjct: 181 SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPD 235