Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., Transcriptional regulatory protein OmpR from Alteromonas macleodii MIT1002

 Score =  159 bits (402), Expect = 5e-44
 Identities = 88/229 (38%), Positives = 135/229 (58%), Gaps = 3/229 (1%)

Query: 7   LYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLTI 66
           + +++DD +LR +L  Y+  QG+QV + A  E     +      L++LDLMLPGE+GL+I
Sbjct: 8   ILVVDDDMRLRSLLERYLLEQGYQVRSAANAEQMDRLLERENFHLMVLDLMLPGEDGLSI 67

Query: 67  CRQIRAQFLGK-ILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRRE--E 123
           CR++R Q     I+MLTA  D+ D +  LEMGADD++ KP  PR LLAR + ++RR   E
Sbjct: 68  CRRLRQQENDMPIIMLTAKGDEVDRIIGLEMGADDYLPKPFNPRELLARAKAVLRRRSSE 127

Query: 124 RTSASADATHLLQFGGLLLNQSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLT 183
              A +    +++FG   LN + R        + L+  EF +L  L +   + +SR+ L 
Sbjct: 128 APGAPSKDVQIVEFGNYKLNLATREMTAGDTPLTLTSGEFAVLKSLVTHPREPLSRDKLM 187

Query: 184 KSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPD 232
              RG +Y  L+R++D ++  LR+ L +D + P+ I TV G GY+FVPD
Sbjct: 188 NLARGRDYSALERSIDVQVSRLRRMLEEDPANPRYIQTVWGLGYVFVPD 236