Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (288), Expect = 7e-30
 Identities = 99/341 (29%), Positives = 163/341 (47%), Gaps = 42/341 (12%)

Query: 130 PVYQAIDRADNL--LFVF-MLGGFALYCM---FLIWFLSRRLRELERVTHDFANGNL-QA 182
           P  +A  R   L  LFVF ML    L  +   +L  F++  L +L       + G+L +A
Sbjct: 342 PEKEAFARVRQLEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEA 401

Query: 183 RASTKSSKSVGKLNHSFNMMA----DKISHLILSNKALTNAI------------------ 220
             +T+    +G+L  SF  M     +KIS +   NK L + +                  
Sbjct: 402 MINTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKD 461

Query: 221 ------AHDLRTPIFRIQWQAEVL---AESQLNAKQQQQVASIIEDTEEMETMVDELLYY 271
                 +H+LRTP+  +   AE L   A   ++A  + Q+  II   + + T+VD+LL Y
Sbjct: 462 EFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDY 521

Query: 272 AKLEHPESDIQSQYLEVNQWLADFIDEQSH---KSSLQIQYLPSLQPLMLDADPQLLTRA 328
            K+ +   DIQ   ++++      ++   H   K +L+I    S QP+ + ADPQ L + 
Sbjct: 522 HKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQV 581

Query: 329 LVNLIRNAEKYAGD-RLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNK 387
           L NLI NA KY  + +++I A+ +D K+ + + D G GI  +   HIF+         ++
Sbjct: 582 LYNLIGNAIKYTSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASR 641

Query: 388 AQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLPL 428
            + G GLGL+I +Q++    G + ++  P+ G  FS  LPL
Sbjct: 642 YRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPL 682