Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., two-component sensor protein (NCBI) from Escherichia coli BW25113

 Score =  149 bits (375), Expect = 2e-40
 Identities = 94/324 (29%), Positives = 172/324 (53%), Gaps = 16/324 (4%)

Query: 115 DSNEQIYLLKPDSHSP---VYQAIDRADNLLFVFMLGGFALYCMFLIWFLSRRLRELERV 171
           + N Q+YL++P S S    +    DR   LL V ML    L  ++L W L++  R+L+  
Sbjct: 138 EDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLL-LWLAWSLAKPARKLKNA 196

Query: 172 THDFANGNLQARASTKSS-KSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFR 230
             + A GNL+     ++  +       SFN M   +  ++ S + L + I+H+LRTP+ R
Sbjct: 197 ADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTR 256

Query: 231 IQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVNQ 290
           +Q    +L      +K+ +++ +   + + +++M+++LL  ++ +   + + S+ ++ NQ
Sbjct: 257 LQLGTALLRRRSGESKELERIET---EAQRLDSMINDLLVMSRNQQKNA-LVSETIKANQ 312

Query: 291 WLADFIDEQSHKS-----SLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEKYAGDRLL 345
             ++ +D  + ++     SL + + P   PL    +P  L  AL N++RNA +Y+  ++ 
Sbjct: 313 LWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLY--GNPNALESALENIVRNALRYSHTKIE 370

Query: 346 IEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMAR 405
           +  +     + I + D+GPG+  +    IF  FY TD +R++   G GLGLAIV+  + +
Sbjct: 371 VGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQ 430

Query: 406 HQGEVTLTKSPLGGACFSLWLPLY 429
           H+G V    SPLGG    +WLPLY
Sbjct: 431 HRGWVKAEDSPLGGLRLVIWLPLY 454