Pairwise Alignments

Query, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., copper-sensing histidine kinase in two-component regulatory system with CusR from Escherichia coli BL21

 Score =  110 bits (275), Expect = 1e-28
 Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 12/271 (4%)

Query: 165 LRELERVTHDFANGNLQARASTKSSK-SVGKLNHSFNMMADKISHLILSNKALTNAIAHD 223
           +R + R   +  + +L  R   ++    + +L  SFN M ++I  +       +  IAH+
Sbjct: 213 IRSVSRQIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHE 272

Query: 224 LRTPIFRIQWQAEV-LAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEH----PE 278
           +RTPI  +  Q E+ L++S+   + +  + S +E+   M  MV ++L+ A+ ++    PE
Sbjct: 273 IRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPE 332

Query: 279 SDIQSQYLEVNQWLADFIDEQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEK 338
             + +   EV + + DF +  +    ++++++       +  DP +L RAL NL+ NA +
Sbjct: 333 KKMLNLADEVGK-VFDFFEALAEDRGVELRFVGD--KCQVAGDPLMLRRALSNLLSNALR 389

Query: 339 YA--GDRLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRNKAQSGFGLGL 396
           Y    + +++   TV+ ++ +++ + G  I  +H P +FD FY    SR +   G G+GL
Sbjct: 390 YTPPSEAIVVRCQTVNHQVQVSVENPGTPIAPEHLPRLFDRFYRVAPSRQRKGEGSGIGL 449

Query: 397 AIVKQIMARHQGEVTLTKSPLGGACFSLWLP 427
           AIVK I+  H+G V +T S   G  F + LP
Sbjct: 450 AIVKSIVVAHKGTVAVT-SDARGTRFVIMLP 479