Pairwise Alignments

Query, 257 a.a., outer membrane protein OmpV from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 59/246 (23%), Positives = 92/246 (37%), Gaps = 38/246 (15%)

Query: 36  WAAEVGAFGSTDLLKDQDKSYGALLNFGYHGEDFNADLSGLNYRFFGNTGDIVNLGTYLT 95
           W   +GA  S D       SY    N+ +      +         F +  D  +L  + T
Sbjct: 46  WYLTIGASVSAD------PSYPGADNYSFRPGLIFSVRKASQLNVFRSVDDNPSLALFDT 99

Query: 96  GS-------GVAYDQDSANSVKGMDKRKATVDLGLNADIALGDGTVSTYFQHDILNENKG 148
           G+        + + +DS +S +          LG N D AL  G  + ++  D L     
Sbjct: 100 GNFRIGAVGRIDWGRDSGDSYR-------LTGLG-NIDPALEAGAFAEWYITDWLRTRAE 151

Query: 149 YKTGVNYFHIID--LGVADLVPFAG--------ISYQSSDYNNYYFGVKDKEATAQRK-- 196
            + GV  F  I   LG   ++P+          ++Y  S Y + YFGV   +A       
Sbjct: 152 LRYGVGGFEGIRGLLGADVILPYGQWRFAVGPRLTYGGSGYMSTYFGVTPVQAVVANAFG 211

Query: 197 ----AYHAGGDFSY-NLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPIVDSANQWLVGA 251
                Y+A   F       +L Y   + +E      Y RL  D A SP+   ANQ+  G 
Sbjct: 212 NPLPVYNASAGFDMVGAMAQLTYNFRNGFETGVFGGYGRLLGDAASSPLTTDANQFTAGV 271

Query: 252 TVAYHF 257
           +++Y F
Sbjct: 272 SLSYTF 277