Pairwise Alignments

Query, 257 a.a., outer membrane protein OmpV from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., MipA/OmpV family protein from Pectobacterium carotovorum WPP14

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 10/258 (3%)

Query: 1   MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALL 60
           MKK  L + A+L++G  L    Y  + ++          +GA GST + +  D     L 
Sbjct: 1   MKKPQLCMLAALVSGAVLLPSAYAADVSL---------GLGAAGSTSVYRGVDNDVYPLP 51

Query: 61  NFGYHGEDFNADLSGLNYRFFGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVD 120
              Y  E F     G  Y  + +  +  +L  Y    G          +K +DKR+ T+ 
Sbjct: 52  VLNYESESFYFRGLGGGYYLWNDGANRFSLTAYYLPLGFKPGDSDDLRMKQLDKRRGTLM 111

Query: 121 LGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIIDLGVADLVPFAGISYQSSDYN 180
            G         G + T    D L+ + G+     Y +   +G   + P  G ++ S + N
Sbjct: 112 AGAAYRHTADWGEIRTVLAGDTLDYSNGFAWDTAYLYRFSMGDLSITPGIGATWFSENMN 171

Query: 181 NYYFGVKDKE-ATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSP 239
            YY+GV  +E A +    Y  G  ++  L     Y IN  W       YTRL  ++  SP
Sbjct: 172 QYYYGVSAQESARSGFNQYSPGDGWAPYLELSAGYQINQSWSAWAVGRYTRLSDEMKDSP 231

Query: 240 IVDSANQWLVGATVAYHF 257
           IVDS +  L+ A V+Y F
Sbjct: 232 IVDSNHSILMSAGVSYRF 249