Pairwise Alignments

Query, 257 a.a., outer membrane protein OmpV from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., scaffolding protein for murein synthesizing machinery (NCBI) from Escherichia coli BW25113

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 11/258 (4%)

Query: 1   MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALL 60
           M K+ L     LIA +A  A            EG+++   G        KD D     + 
Sbjct: 1   MTKLKLLALGVLIATSAGVAHA----------EGKFSLGAGVGVVEHPYKDYDTDVYPVP 50

Query: 61  NFGYHGEDFNADLSGLNYRFFGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVD 120
              Y G++F     G  Y  + +  D +++  Y +           + ++ +D RK+T+ 
Sbjct: 51  VINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMM 110

Query: 121 LGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIIDLGVADLVPFAGISYQSSDYN 180
            GL+       G + T    D L+ + G    + + +    G   + P  G+ + S + N
Sbjct: 111 AGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQN 170

Query: 181 NYYFGVKDKE-ATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSP 239
            YY+GV  KE A +  + Y+    +S  L     Y     W +  T+ YTRL  ++  SP
Sbjct: 171 EYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSP 230

Query: 240 IVDSANQWLVGATVAYHF 257
           +VD +   L+   + Y F
Sbjct: 231 MVDKSWTGLISTGITYKF 248