Pairwise Alignments

Query, 257 a.a., outer membrane protein OmpV from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., putative outer membrane protein from Escherichia coli BL21

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 5/169 (2%)

Query: 94  LTGSGVAYDQDSANS----VKGMDKRKATVDLGLNADIALGDGTVSTYFQHDILNENKGY 149
           LT S +  + D A++    ++ +DKR +T   G+        GTV      D+L+ + G+
Sbjct: 78  LTASWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGW 137

Query: 150 KTGVNYFHIIDLGVADLVPFAGISYQSSDYNNYYFGVKDKEATAQRKA-YHAGGDFSYNL 208
              ++ FH + +G   L P  G+ Y   ++++YY+G+ + E+     A Y A   +   +
Sbjct: 138 VGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYV 197

Query: 209 GYKLVYPINDRWEITQTSAYTRLGSDIAHSPIVDSANQWLVGATVAYHF 257
                YPI +   +  ++ Y+ L  +I  SP++D    +     V++ F
Sbjct: 198 SLTAKYPIVEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF 246