Pairwise Alignments

Query, 306 a.a., DUF535 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., VirK/YbjX family protein from Pantoea agglomerans CFBP13505 P0401

 Score =  105 bits (262), Expect = 1e-27
 Identities = 86/276 (31%), Positives = 132/276 (47%), Gaps = 12/276 (4%)

Query: 29  RYNARFCLWGILMPDTLARIQDLLNQPSFHPVRQHYPRTLEKPL-KPYVCVKWPPQERAQ 87
           R+  +F L  ++ P T  R  D L+     P+       L   L +PY+        RAQ
Sbjct: 36  RFRLKFVLRTLISPLTTLRYLDELSHLPQLPLLMSTQGLLPAKLHRPYLRSGLSIAARAQ 95

Query: 88  RLIEHFAFLEKRH----AQLLPLIYRHQGWSLF--QHELFSIQLCHGP-EREGSLALVLL 140
            +++H++ +         QLL     +   +L     E F +    G  +REG + LVL 
Sbjct: 96  AILDHYSLMNNLENPALRQLLQSATDNPLATLTGKNSEAFLLSCSSGYFDREGEVTLVLR 155

Query: 141 SQDHQPLFTLAFNI-SGRNKPVIHIGALQGPGPNVENRQEIIRQLTHQLHGLRPKALIME 199
             D + + +L+F+I +  N+  + IG LQGP  ++ N  E+IR+ T    GL PK L+ME
Sbjct: 156 YND-EIIASLSFSILNENNQRTLLIGGLQGPRKHINN--EVIREATKAAQGLFPKRLLME 212

Query: 200 VLLILARYWCVEKVYGVTNEGHVYQALRYIGSKRSSVRFQYSELWQEMGGEAINPYWHSL 259
            + I+A+   VE +  V +E HV+++LRY  SK       YSE W  + GEA       L
Sbjct: 213 AVFIVAKQCGVENILAVGDETHVFRSLRYRHSKGDKFFASYSEFWLSLSGEARRDGMFIL 272

Query: 260 PTHPPRKAPLSLSKTKRRLYTKRYAWLTELEQSIQA 295
           P   PRK    ++  KR  Y +RY  L  L + + A
Sbjct: 273 PLSLPRKTLEEIASKKRAEYRRRYELLDALAEQVYA 308