Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., putative sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 98/344 (28%), Positives = 149/344 (43%), Gaps = 60/344 (17%)

Query: 112 TQFMPVIVAELSQRQRRATQEAVAKERALER-----------LYSAEQMTTLGQLAAGIA 160
           TQ   + + +L QR  R TQ+      AL++           L  +E++ +LGQ+AAG+A
Sbjct: 161 TQRASLKMHQLEQRVERRTQQLTQASEALQQEIEERKQLESQLVQSEKLASLGQMAAGVA 220

Query: 161 HELNNAIGVVSSKTERLEALFMELLEEVHPEASQFFDFGLLFGQKVSSSEARERGAVFEK 220
           HE+NN IG VSS    L   F +L+  +                                
Sbjct: 221 HEINNPIGFVSSNLGTLGGYFQQLVAML-------------------------------- 248

Query: 221 QYQLPKDIARELARAVPANELSAHWLKNPHLAIRYWQMGRDLHDLRLAAKHSVG----IV 276
                 D  RE    + ANE +   L+          +  D+  L   +K  +G    IV
Sbjct: 249 ------DAYREAELMLGANETTGR-LQRLREQTELEFLMEDIPILIKESKDGIGRVAHIV 301

Query: 277 KSVKQLGRADIRLDEEV-DLNSTINRALALLQSDLR-RVSVRMRPGSLPIIKGSQTEWVQ 334
           K +K   R D     ++ DL   I+  L ++ S+L+ +  +  R   LP ++   ++  Q
Sbjct: 302 KDLKDFSRVDSAQQWQLADLQQGIDSTLNIVASELKHKADLVKRYQPLPPVECLPSQINQ 361

Query: 335 VWINLIKNACDAMAQTTEPTIDIQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKK 394
           V +NL+ NA  AM      TI + T      + + VA+ G  I     +KIF P FTTK 
Sbjct: 362 VIMNLVLNAAQAMGPE-RGTITLGTAHQGAWVCIEVADTGAGIAPENIKKIFDPFFTTKP 420

Query: 395 EGLSFGLGLGLAIVKRIVSGYGGTVAVKSDQD-KTIFRIKLPVE 437
            G   G GLGL++   IV  +GG + V S     T FR++LPV+
Sbjct: 421 VGQ--GTGLGLSLSYGIVKKHGGEITVSSQVGVGTTFRVQLPVK 462