Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 40/321 (12%)

Query: 123 SQRQRRATQEAVAKERALERLYSAEQMTTLGQLAAGIAHELNNAIGVVSSKTERLEALFM 182
           +Q +R   +   A ++A      A +M ++GQLAAGIAHE+N  I  V        A   
Sbjct: 357 AQLERLVEERTEALKQAQIEALQASRMASVGQLAAGIAHEINTPIQYVGDNL----AFIQ 412

Query: 183 ELLEEVHPEASQFFDFGLLFGQKVSSSEARERGAVFEKQYQLPKDIARELARAVPANELS 242
              E V P  S+     L    +V   +A +     +       D   E    +PA    
Sbjct: 413 SAAEAVFPLLSEAR--ALAESWRVGEGDAGKTEEFLQHYDAAGLDFLME--ETLPA---- 464

Query: 243 AHWLKNPHLAIRYWQMGRDLHDLRLAAKHSVGIVKSVKQLGRADIRLDEEVDLNSTINRA 302
                          + + L  +   A+    IV S+K+           VD+N  ++  
Sbjct: 465 ---------------VTQSLEGVAQVAR----IVLSMKEFSHPGTSQKTAVDINRALDST 505

Query: 303 LALLQSDLR---RVSVRMRPGSLPIIKGSQTEWVQVWINLIKNACDAMAQTTEP---TID 356
           L + ++  +   R+  R  P +LP++     E  QV++NLI NA  A+ ++ +P   TI 
Sbjct: 506 LVVCRNTWKHVARMETRFDP-ALPLVNCHPGEMNQVFLNLIVNAAHAIEESGKPLPGTIT 564

Query: 357 IQTRCSRQRLYVTVANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIVSGYG 416
            +T        + ++++G  I +   + IF P FTTK+ G   G GL +     +V+ +G
Sbjct: 565 AETALCGDWAEIRISDSGTGISDEIAQHIFDPFFTTKEVGKGTGQGLAIC-YDVVVNKHG 623

Query: 417 GTVAVKSDQDK-TIFRIKLPV 436
           G + V  + +   IF I++PV
Sbjct: 624 GQIVVGGEPEHGAIFTIRIPV 644