Pairwise Alignments

Query, 449 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 39/253 (15%)

Query: 217 VFEKQYQLPKDIARELARAVPANELS------AHWLKNPHLAIR----YWQMGRDLHDLR 266
           VF+++    K I R+L     A  ++      AH +KNP   IR      +M     D  
Sbjct: 117 VFQERSMADK-IDRQLTHRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLEMSVPDEDRA 175

Query: 267 LAAKHSVGIVKSVKQLGRADIRLDEE------VDLNSTINRALALLQSDLRR---VSVRM 317
           L         + V  + R +I  DE       V+++S ++   A+ ++   R   +S   
Sbjct: 176 LTRLICDETDRIVSLVDRMEIFSDERPVDRVPVNIHSVLDHVKAIAKAGFARNIKISENY 235

Query: 318 RPGSLPIIKGSQTEWVQVWINLIKNACDAMAQTTE----------PTIDIQTRCSRQRLY 367
            P SLP +  ++ + VQV++NL+KNA +A+A   +          P I +    SR+R+ 
Sbjct: 236 DP-SLPAVYANRDQLVQVFLNLVKNAAEAVANQPDGEVVLTTAYRPGIRLSVAGSRERIS 294

Query: 368 VT----VANNGPEIDEATRRKIFQPSFTTKKEGLSFGLGLGLAIVKRIVSGYGGTVAVKS 423
           +     V +NGP +       +F P  TTK  G     GLGLA+V +++  +GG V   S
Sbjct: 295 LPLEFCVHDNGPGVPSDLLPHLFDPFITTKTNGS----GLGLALVAKLIGAHGGIVECDS 350

Query: 424 DQDKTIFRIKLPV 436
              +T FR+ +PV
Sbjct: 351 QNHRTTFRVLMPV 363