Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., Citrate Succinate antiporter (TC 2.A.47.3.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 85.1 bits (209), Expect = 5e-21
 Identities = 105/488 (21%), Positives = 217/488 (44%), Gaps = 47/488 (9%)

Query: 23  KYIIPLLIPMLVLMLPATAFPFEGLTVIQQRVIAIFLLAALLWVFEPIPIYSTSVVIIVL 82
           K + PL++  ++L++P      +G+        A+F+   +  + EPIP  + S + + +
Sbjct: 10  KLLAPLVVMGVMLLIPVP----DGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTI 65

Query: 83  EVLMLSDKGFILFRLGE-GTSEFGALLKSTEI-MATFANPIIMLFLGGFFLAMAATKYRL 140
            V+      ++LF   E     F A  ++ +  +A F++  + L  G F  A+      L
Sbjct: 66  CVI---GSNYLLFDASELADPAFKASKQALKWGLAGFSSTTVWLVFGAFIFALGYEVTGL 122

Query: 141 DVNLARVLLKPFGNNPKYVMLGLMMITAVFSMFM-SNTATTA----MMLSILTPVIAVFG 195
              +A  L+K  G     +   +++I  + + F  SNTA T      ++  L P+   F 
Sbjct: 123 GRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSF- 181

Query: 196 PKDPG--RVAFAL--CIPVAANIGGIGTPIGTPPNAIALKYL--VGDNLITFAEWMAFGI 249
           P DP   R+   L   + ++ ++       G  PN + L+++  +    I++ +W    +
Sbjct: 182 PNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGVQISWLQWFLSFL 241

Query: 250 PFVVILMALAWLLIEFMYRAEQKTI---------ELTIKGKFLKTPKAIIVYITFASTIL 300
           P  +IL+ +A  L   +Y+ E             EL   G+  +    +I  +    ++ 
Sbjct: 242 PVGIILLIVAPWLSYVLYKPEVTHSAEVAAWAGGELKNMGRLSRKEWTLIGLVLL--SLG 299

Query: 301 LWMLGSLHGMNSYSVALIPVAVFSVTGIIGKEDLKMI--SWDVLWLVSGGIALGLALDKT 358
           LW+ G    +N+ +V L+ V++     ++  +D+     +W+ L  ++  + +   L ++
Sbjct: 300 LWVFGG-KIINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRS 358

Query: 359 GLAELVVH--SIPFDQYSP----YVVILGAAILCLLMANFMSHTATANLLMPIMAALGAS 412
           G  +   +  S   + +SP     V++L       L A+  +HTAT   ++P++ A+G  
Sbjct: 359 GFIDWFANTMSTHLEGFSPDATVIVLVLVFYFAHYLFASLSAHTAT---MLPVILAVGKG 415

Query: 413 MTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHATRNVQSQQMAKVGIILGIFGV 472
           + P  P+  E   IL+V     +G   P +T P  + +    V+S+   ++G I G+  +
Sbjct: 416 I-PGVPM--EQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSRDYWRLGAIFGVIYI 472

Query: 473 LMSFVMVW 480
            M  ++ W
Sbjct: 473 AMLLLVGW 480



 Score = 38.1 bits (87), Expect = 7e-07
 Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 54  VIAIFLLAALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGALLKSTEI 113
           +I + LL+  LWVF    I +T+V ++ + +++      +     +  + + +   +   
Sbjct: 290 LIGLVLLSLGLWVFGGKIINATAVGLLAVSLMLA-----LHVVPWKDITRYNSAWNTLVN 344

Query: 114 MATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITAVFSMF 173
           +AT       L   GF    A        N     L+ F  +   ++L L+   A + +F
Sbjct: 345 LATLVVMANGLTRSGFIDWFA--------NTMSTHLEGFSPDATVIVLVLVFYFAHY-LF 395

Query: 174 MSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIG--TPIGTPPNAIALK 231
            S +A TA ML    PVI   G   PG     LCI +  +IG +G  TP  T P  I   
Sbjct: 396 ASLSAHTATML----PVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVI--- 448

Query: 232 YLVGDNLITFAEW----MAFGIPFVVILMALAWLLI 263
            + G   +   ++      FG+ ++ +L+ + W ++
Sbjct: 449 -IYGCGYVKSRDYWRLGAIFGVIYIAMLLLVGWPIL 483