Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  108 bits (270), Expect = 4e-28
 Identities = 106/441 (24%), Positives = 199/441 (45%), Gaps = 44/441 (9%)

Query: 55  IAIFLLAALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGALLKSTEIM 114
           + + + A +++V+E +P+  TS+++ V  V+                     +L   +  
Sbjct: 8   LCLLVFAIVMFVWEKVPLAVTSMIVCVALVIT-------------------GVLNIKQAF 48

Query: 115 ATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITAVFSMFM 174
           A F +  ++LF+  F +  A  +  +   +  V+ + F    K ++  +M++  + S  +
Sbjct: 49  AGFIDTNVILFVAMFIVGGALFETGMANKVGGVITR-FAKTEKQLIFTIMVVVGLMSGVL 107

Query: 175 SNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALKYL- 233
           SNT T A+++ +   VI V       R    + +  AA +GG  + IG P N IA   L 
Sbjct: 108 SNTGTAAVLIPV---VIGVAAKSGFSRSRLLMPLVFAAALGGNLSLIGAPGNLIAQSALQ 164

Query: 234 -VGDNLITFAEWMAFGIPFVVILMALAWLLIEFMYRAEQKTI----ELTIKGKFLKTP-- 286
            +G     F E+   G+P ++I   L +L I + +     T      + ++  +   P  
Sbjct: 165 NIGGGF-GFFEYAKIGLP-MLICGILYFLTIGYRFLPNNATGGEVGSVGVQRDYSHVPQW 222

Query: 287 KAIIVYITFASTILLWMLGSLHGMNSYSVALIPVAVFSVTGIIG-KEDLKMISWDVLWLV 345
           K  +  +   +TIL  +     G++      I   V  V+G++  K+  K I    +++ 
Sbjct: 223 KQRLSLVVLIATILGMIFEKKIGVSLAVTGCIGALVLVVSGVLTEKQAYKAIDSQTIFIF 282

Query: 346 SGGIALGLALDKTGLAELV---VHSIPFDQYSPYVVILGAAILCLLMANFMSHTATANLL 402
            G +AL  AL+ TG  +LV   V  +     SP+++++    L ++M NFMS+TAT  LL
Sbjct: 283 GGTLALAKALEMTGAGKLVADYVIGMLGQNSSPFMLLIAVFALSVVMTNFMSNTATTALL 342

Query: 403 MPIMAALGASMTPLNPLGGEVTLILVVT-FAASLGMSLPISTPPNALAHATRNVQSQQMA 461
           +P+  ++ A M      G +   +L+ T    S   + PI  P N +  +    +    A
Sbjct: 343 VPVSLSIAAGM------GADPRAVLMATVIGGSCAYATPIGMPANMMVLSAGGYKFVDYA 396

Query: 462 KVGIILGIFGVLMSFVMVWIL 482
           K GI L I   ++S +++ IL
Sbjct: 397 KAGIPLIIVSTIVSLILLPIL 417