Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., SLC13 family permease from Erwinia tracheiphila SCR3

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 7/147 (4%)

Query: 335 KMISWDVLWLVSGGIALGLALDKTGLAELVVHSIP--FDQYSPYVVILGAAILCLLMANF 392
           + I W  + L+ G +   LAL KTG   L+V  +       SP+V++L   ILC  +  F
Sbjct: 463 RAIHWPSIILIVGMMPFALALQKTGGVRLIVDGLMDLAGDKSPHVMLLCLFILCATIGLF 522

Query: 393 MSHTATANLLMPIMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHAT 452
           +S+TATA L+ PI  A    M  ++P        L++  AAS     P+S+P N L    
Sbjct: 523 ISNTATAVLMAPIGIAAAGQM-GVSP----YPFTLIIAVAASAAFMTPVSSPVNTLVLGP 577

Query: 453 RNVQSQQMAKVGIILGIFGVLMSFVMV 479
              +     K+G+   I  +++S ++V
Sbjct: 578 GGYRFSDFVKMGVPFTILIMVVSVMLV 604



 Score = 55.1 bits (131), Expect = 7e-12
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 120 PIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVML-GLMMITAVFSMFMSNTA 178
           P I+L +G    A+A  K      +   L+   G+   +VML  L ++ A   +F+SNTA
Sbjct: 468 PSIILIVGMMPFALALQKTGGVRLIVDGLMDLAGDKSPHVMLLCLFILCATIGLFISNTA 527

Query: 179 TTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALKYLVGDNL 238
           T  +M  I    IA  G        F L I VAA+     TP+ +P N + L    G   
Sbjct: 528 TAVLMAPI---GIAAAGQMGVSPYPFTLIIAVAAS-AAFMTPVSSPVNTLVL----GPGG 579

Query: 239 ITFAEWMAFGIPFVVILMALAWLLIEFMY 267
             F++++  G+PF +++M ++ +L+   +
Sbjct: 580 YRFSDFVKMGVPFTILIMVVSVMLVPLFF 608



 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 112 EIMATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITAVFS 171
           E  A F++P ++L    F +     +  + + +   L+K  G++   +++ LM+  A   
Sbjct: 47  ESTAGFSDPNVILIAALFVIGEGLVRTGVALKMGEWLIKMAGSSETKMLILLMVTVAGLG 106

Query: 172 MFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALK 231
            FMS+T   A+ + ++  V A      PGR+   L    A  I G+ T + TPPN +   
Sbjct: 107 AFMSSTGVVAIFIPVVMSVAARM-KTSPGRLMMPLSF--AGLISGMMTLVATPPNLVVNS 163

Query: 232 YLVGDNLITFAEWMAFGIPFVVILMALAWLLI 263
            L+   L  F  +    +  + +++ + ++L+
Sbjct: 164 ELLRAGLAGFRFFDVTPVGLIALILGIGYMLV 195



 Score = 31.6 bits (70), Expect = 8e-05
 Identities = 42/206 (20%), Positives = 91/206 (44%), Gaps = 17/206 (8%)

Query: 287 KAIIVYITFASTILLWMLGSLHGMNSYSVALIPVAVFSVTGIIG-KEDLKMISWDVLWLV 345
           K +I  ++  S +++  +     M+   VAL+ +  F ++G +  +E     S   + L+
Sbjct: 3   KELIWVLSLLSFVIMLFISGKLRMDV--VALLVIIAFVLSGTLTLQESTAGFSDPNVILI 60

Query: 346 SGGIALGLALDKTGLA-ELVVHSIPFDQYSPYVVILGAAILCLLMANFMSHTATANLLMP 404
           +    +G  L +TG+A ++    I     S   +++   +    +  FMS T    + +P
Sbjct: 61  AALFVIGEGLVRTGVALKMGEWLIKMAGSSETKMLILLMVTVAGLGAFMSSTGVVAIFIP 120

Query: 405 IMAALGASMTPLNPLGGEVTLILVVTFAASL-GMSLPISTPPNALAHA------TRNVQS 457
           ++ ++ A M           L++ ++FA  + GM   ++TPPN + ++          + 
Sbjct: 121 VVMSVAARMKT-----SPGRLMMPLSFAGLISGMMTLVATPPNLVVNSELLRAGLAGFRF 175

Query: 458 QQMAKVGIILGIFGV-LMSFVMVWIL 482
             +  VG+I  I G+  M     W++
Sbjct: 176 FDVTPVGLIALILGIGYMLVARFWLV 201