Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., citrate/succinate antiporter CitT from Escherichia coli ECRC62

 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 110/487 (22%), Positives = 219/487 (44%), Gaps = 45/487 (9%)

Query: 23  KYIIPLLIPMLVLMLPATAFPFEGLTVIQQRVIAIFLLAALLWVFEPIPIYSTSVVIIVL 82
           K + PL++  ++ ++P      +G+        A+F+   +  + EPIP  + S + + +
Sbjct: 10  KLLAPLVVMGVMFLIPVP----DGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTI 65

Query: 83  EVLMLSDKGFILFRLGE-GTSEFGALLKSTEI-MATFANPIIMLFLGGFFLAMAATKYRL 140
            V+      ++LF   E     F A  ++ +  +A F++  + L  G F  A+      L
Sbjct: 66  CVI---GSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVSGL 122

Query: 141 DVNLARVLLKPFGNNPKYVMLGLMMITAVFSMFM-SNTATTA----MMLSILTPVIAVFG 195
              +A  L+K  G     +   +++I  + + F  SNTA T      ++  L P+   F 
Sbjct: 123 GRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSF- 181

Query: 196 PKDPG--RVAFALC--IPVAANIGGIGTPIGTPPNAIALKYL--VGDNLITFAEWMAFGI 249
           P DP   R+   L   + ++ ++       G  PN + L+++  +    I++ +W    +
Sbjct: 182 PNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCFL 241

Query: 250 PFVVILMALAWLLIEFMYRAEQKTIE--LTIKGKFLKTPKAI------IVYITFASTILL 301
           P  VIL+ +A  L   +Y+ E    E   T  G  LKT  A+      ++ +   S + L
Sbjct: 242 PVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLS-LGL 300

Query: 302 WMLGSLHGMNSYSVALIPVAVFSVTGIIGKEDLKMI--SWDVLWLVSGGIALGLALDKTG 359
           W+ GS   +N+ +V L+ V++     ++  +D+     +W+ L  ++  + +   L ++G
Sbjct: 301 WVFGS-EVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSG 359

Query: 360 LAELV--VHSIPFDQYSP----YVVILGAAILCLLMANFMSHTATANLLMPIMAALGASM 413
             +      S   + +SP     V++L       L A+  +HTAT   ++P++ A+G  +
Sbjct: 360 FIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTAT---MLPVILAVGKGI 416

Query: 414 TPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHATRNVQSQQMAKVGIILGIFGVL 473
            P  P+  E   IL+V     +G   P +T P  + +    V+S+   ++G I G+  + 
Sbjct: 417 -PGVPM--EQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYIS 473

Query: 474 MSFVMVW 480
           M  ++ W
Sbjct: 474 MLLLVGW 480



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 28/223 (12%)

Query: 47  LTVIQQRVIAIFLLAALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGA 106
           LT  +  +I + LL+  LWVF    I +T+V ++ + +++      +     +  + + +
Sbjct: 283 LTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLA-----LHVVPWKDITRYNS 337

Query: 107 LLKSTEIMATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMI 166
              +   +AT       L   GF    A T            L+ F  N   ++L L+  
Sbjct: 338 AWNTLVNLATLVVMANGLTRSGFIDWFAGTM--------STHLEGFSPNATVIVLVLVFY 389

Query: 167 TAVFSMFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIG--TPIGTP 224
            A + +F S +A TA ML    PVI   G   PG     LCI +  +IG +G  TP  T 
Sbjct: 390 FAHY-LFASLSAHTATML----PVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATG 444

Query: 225 PNAIALKYLVGDNLITFAEW----MAFGIPFVVILMALAWLLI 263
           P  I    + G   +   ++      FG+ ++ +L+ + W ++
Sbjct: 445 PGVI----IYGCGYVKSKDYWRLGAIFGVIYISMLLLVGWPIL 483