Pairwise Alignments

Query, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Uncharacterized transporter YfbS from Escherichia coli ECRC62

 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 120 PIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLG-LMMITAVFSMFMSNTA 178
           P I+L +G    A+A  K        + L+   G    ++MLG L +++AV  +F+SNTA
Sbjct: 468 PSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTA 527

Query: 179 TTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALKYLVGDNL 238
           T  +M  I        G        FA+ + +AA+     TP+ +P N + L    G   
Sbjct: 528 TAVLMAPIALAAAKTMGVSP---YPFAMVVAMAAS-AAFMTPVSSPVNTLVL----GPGN 579

Query: 239 ITFAEWMAFGIPFVVILMALAWLLIEFMY 267
            +F++++  G+PF +I+MA+  ++I  ++
Sbjct: 580 YSFSDFVKLGVPFTIIVMAVCVVMIPMLF 608



 Score = 58.5 bits (140), Expect = 6e-13
 Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 319 PVAVFSVTGIIGK-------EDLKMISWDVLWLVSGGIALGLALDKTGLAELVVHSIPF- 370
           PVA      ++GK          K I W  + L+ G +   +AL KTG   L V  +   
Sbjct: 440 PVAAIIACLLMGKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDI 499

Query: 371 -DQYSPYVVILGAAILCLLMANFMSHTATANLLMPIMAALGASMTPLNPLGGEVTLILVV 429
              Y P++++    +L  ++  F+S+TATA L+ PI  A   +M  ++P        +VV
Sbjct: 500 GGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMG-VSPY----PFAMVV 554

Query: 430 TFAASLGMSLPISTPPNALAHATRNVQSQQMAKVGIILGIFGVLMSFVMVWIL 482
             AAS     P+S+P N L     N       K+G+   I  + +  VM+ +L
Sbjct: 555 AMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPML 607



 Score = 54.3 bits (129), Expect = 1e-11
 Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 4/163 (2%)

Query: 112 EIMATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITAVFS 171
           E+ + F++P ++L    F +     +  +   +   L+K  GN+   +++ LM+  A   
Sbjct: 47  EVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLG 106

Query: 172 MFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAIALK 231
            FMS+T   A+ + ++  V A+     P R+   L    A  I G+ T + TPPN +   
Sbjct: 107 AFMSSTGVVAIFIPVVLSV-AMRMQTSPSRLMMPLSF--AGLISGMMTLVATPPNLVVNS 163

Query: 232 YLVGDNLITFAEWMAFGIPFVVILMALAWLLI-EFMYRAEQKT 273
            L+ +    F+ +    I  VV+++ + ++L+  FM + + +T
Sbjct: 164 ELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQT 206