Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  235 bits (600), Expect = 4e-66
 Identities = 143/393 (36%), Positives = 229/393 (58%), Gaps = 4/393 (1%)

Query: 154 TFEALESDFTLLIGILHQAMDSNKVQILSSVKTLNSTSV----ASNIAILAIMVLMTWLL 209
           T    ++ +TL++ +   A+ ++  ++ S ++    T +     + + I  I +L+ WL+
Sbjct: 320 TIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGIGLLVIWLV 379

Query: 210 TRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIIS 269
              I  PL  ++   N IA+G+   T   +S   DELG +AN        L+ +I +++S
Sbjct: 380 GHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVS 439

Query: 270 AVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMA 329
           +V ++S + E    I+ ++  G+ +Q  +I QVATA+ +M A   DVARN   +A  A  
Sbjct: 440 SVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASH 499

Query: 330 ANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLL 389
           A+  + +G R       SI  +A+ IG+A   V  L + S  IN ++  IR IA+QTNLL
Sbjct: 500 ADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLL 559

Query: 390 ALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERS 449
           ALNAAIEAARAGE GRGFAVVADEVR LA +TQ +T EI T+I++LQ   +      E S
Sbjct: 560 ALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDS 619

Query: 450 RSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLAS 509
           +S  D+ V+    +   + +I ++++ I D+ TQIASA  EQ +VA++++RNV NI   +
Sbjct: 620 QSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVA 679

Query: 510 QEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
            EVA G+ +++ A  +LT+LA   +  + +FK+
Sbjct: 680 NEVAGGADESSAASADLTKLAEQQRRLINQFKV 712