Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  239 bits (609), Expect = 3e-67
 Identities = 137/354 (38%), Positives = 216/354 (61%), Gaps = 2/354 (0%)

Query: 189 STSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGT 248
           S  + S +  L + V+   ++TR I  P+   +     IA GDLS  +  +    DELG 
Sbjct: 288 SLQLISTLLALLVGVIAALVITRQITRPIQETLAVVERIASGDLSHNIQVTR--RDELGV 345

Query: 249 LANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQ 308
           L    ++M   LR+LI  I   VTQ++SA EE++ ++ Q++ G+  Q+ +  QVATAM +
Sbjct: 346 LQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHE 405

Query: 309 MKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQ 368
           M A V +VARN E ++  A  A+ +++ G +  A  +  I+++A  +  +   ++ L+Q+
Sbjct: 406 MTATVQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQE 465

Query: 369 SSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEI 428
           S++I  V+DVI+++A+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST EI
Sbjct: 466 SNKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEI 525

Query: 429 TTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASAC 488
             ++  LQ   +Q  +    SRS  D  VE    +   + +I  +++NI  +  QIA+A 
Sbjct: 526 EGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAA 585

Query: 489 SEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
            +Q +VA+E+SR++ N+   S++ A  S +TA++  EL +L   LQ  +  F++
Sbjct: 586 EQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFRV 639