Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  483 bits (1244), Expect = e-141
 Identities = 261/541 (48%), Positives = 367/541 (67%)

Query: 2   FLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKDK 61
           F KNL+IGKKIA +F VIA+I+L F  YL + L  I+S++LN TDDTLP+M  V+ IK  
Sbjct: 3   FFKNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYN 62

Query: 62  MSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMGN 121
           MS  RR Q ++L   DEA+I + I   N    +I   L  Y +++W   E   F  +   
Sbjct: 63  MSSVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNL 122

Query: 122 WNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEALESDFTLLIGILHQAMDSNKVQIL 181
           WN Y      FN  +L +    A   L  SL TFE LE+    L+ +    +D+N+ ++ 
Sbjct: 123 WNEYLRQLGSFNNDILQKEMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELT 182

Query: 182 SSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSI 241
             +  ++  SVAS +A+LA M  +TWLLT LIC PL  V+ Q+NAIA+G+L+  +DR +I
Sbjct: 183 ELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTI 242

Query: 242 GNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQ 301
           G+DELG LA+A  +MQ NLR +++EII++ TQL+ AV+E++ +S Q++ GM+ QQ ++ Q
Sbjct: 243 GHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQ 302

Query: 302 VATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQT 361
           +ATAMA+MK+ VA+VARNTE ++  +  ++  +  G+++  ++  SIQ V   IG   Q 
Sbjct: 303 IATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQR 362

Query: 362 VSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRT 421
           V ELE Q+ QIN+VVDVI +IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LAG+T
Sbjct: 363 VLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKT 422

Query: 422 QDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVG 481
           Q STG+I  II+ LQ  A++A++ T  SR  I+ CVEQ   +Q  +  I    + IAD+ 
Sbjct: 423 QQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMT 482

Query: 482 TQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFK 541
            QIASAC EQDSV++ELSRN+E I+ ++++VAQGS   AQ+C EL+QLA  LQDT++RF+
Sbjct: 483 IQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFR 542

Query: 542 I 542
           +
Sbjct: 543 L 543