Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (532), Expect = 2e-58
 Identities = 128/352 (36%), Positives = 210/352 (59%), Gaps = 8/352 (2%)

Query: 194 SNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANAS 253
           + + +  +M+ +  +++R +  PL  +      +A+GDL  T     +G DELG +A   
Sbjct: 190 ATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDL--TAQIPVLGKDELGIVA--- 244

Query: 254 EQMQQNLRQLIDEIISAVTQLSSAVEEMTQISN---QSADGMKEQQYQITQVATAMAQMK 310
           +++  ++  + D ++ +V   SS  E   +I++   +++  +  Q+ Q++Q+ATAM QM 
Sbjct: 245 QRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMT 304

Query: 311 AAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQSS 370
           A VADVA + ED+A   + A+ ++  G ++  S V SI+ ++  +G A   V++L++   
Sbjct: 305 ATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVM 364

Query: 371 QINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITT 430
           QI+ V  VI  I++QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT  ST EI T
Sbjct: 365 QISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQT 424

Query: 431 IIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASACSE 490
           +I +LQ +A     A ++S++     V    ++ S +  I   I +++D  TQIA+A  E
Sbjct: 425 MINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEE 484

Query: 491 QDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542
           Q +VA+E++RNV  I+ A+ E++Q +   A+   +L  L+  L   L  FK+
Sbjct: 485 QSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536