Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  251 bits (640), Expect = 6e-71
 Identities = 163/542 (30%), Positives = 282/542 (52%), Gaps = 3/542 (0%)

Query: 1   MFLKNLSIGKKIAASFSVIAVISLGFAIYLISELDKIQSELLNYTDDTLPAMENVDAIKD 60
           M L+N++I  +    F++I ++ LG  I+ + ++  I+   +     ++P+++ +D +  
Sbjct: 1   MSLRNMNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTA 60

Query: 61  KMSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWPGEEEQTFKRLMG 120
                R   + +L  ++ A  R T++  ++  ++I+ +  AY   +   +E+  F +   
Sbjct: 61  LNLRMRTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQ 120

Query: 121 NWNAYTAVTDQFNQTLLTQGADDAYPILANSL-STFEALESDFTLLIGILHQAMDSNKVQ 179
             N Y  +  +          D+   +L   L +  E +      L+ I      +   +
Sbjct: 121 LLNQYRQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRATNEK 180

Query: 180 ILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRS 239
             +      +  +   +A   +     +LLTR I  P+   +K +  +A GDL+  +   
Sbjct: 181 AANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAE 240

Query: 240 SIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQI 299
             G DE   L  A  +MQ  LR  + +I  + TQL+SA EE+  ++++SA G+++Q  +I
Sbjct: 241 --GTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEI 298

Query: 300 TQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAG 359
            Q ATA+ +M +AV +VARN   ++  +  A+  + +G       V +I++++  +    
Sbjct: 299 EQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATA 358

Query: 360 QTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAG 419
           + ++ L +QS  I  V+DVIR +ADQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA 
Sbjct: 359 KLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAH 418

Query: 420 RTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIAD 479
           RTQ ST EI  +I  +Q   ++A ++   S    +  +     +   + +I  ++A I +
Sbjct: 419 RTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINE 478

Query: 480 VGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRR 539
               IASA  EQ  VA E+ RN+ NI+  S + A G+ QT+ A  EL++LAV L   + R
Sbjct: 479 RNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVAR 538

Query: 540 FK 541
           F+
Sbjct: 539 FR 540