Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  228 bits (580), Expect = 7e-64
 Identities = 133/364 (36%), Positives = 214/364 (58%), Gaps = 2/364 (0%)

Query: 179 QILSSVKTLNSTSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDR 238
           Q+  ++ T N+  +   I  +A+   + ++  R I  PL  V +     + GDL+  +D 
Sbjct: 313 QVNGAIATGNTFVIVVVIISIAVAAFIGYVTVRAITRPLYRVNELLTVASSGDLTHRLDD 372

Query: 239 SSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQ 298
           S+   DE G LA     +  NL++LI  I     QL++A E+ + ++ Q+   +++Q+ Q
Sbjct: 373 SA--QDEFGLLARNCNTLIGNLKELITAINVRAEQLAAASEQTSAVTAQTTHSIQDQKSQ 430

Query: 299 ITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEA 358
           I QVATA  +M +    V +N ED+ SQ   A+ +++   + +     +I+ ++  + EA
Sbjct: 431 IGQVATATTEMHSTSQLVVQNAEDTLSQIRHADAEAENVRQISLENKNTIEILSRDVQEA 490

Query: 359 GQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLA 418
              +++L Q S+ I  ++DVIR +ADQTNLLALNAAIEAARAGE GRGFAVVADEVRTLA
Sbjct: 491 ADVINKLHQDSASIGGILDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 550

Query: 419 GRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIA 478
            RTQ+ST EI  +IE LQ  A++A     + +     CV Q   +   +  I +++    
Sbjct: 551 SRTQESTQEINAMIEVLQAGAEKAVSVMNQGKEQTAACVAQTEKATQALDIISDAVHKAH 610

Query: 479 DVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLR 538
           DV +QI  +  EQ++V+ E+S  +E I   ++E   G+QQT+++  E+ +LA  LQ ++R
Sbjct: 611 DVSSQIEQSAREQNTVSQEISEKLETIVGIAEETTAGAQQTSESSHEVARLAEELQQSIR 670

Query: 539 RFKI 542
           +FK+
Sbjct: 671 QFKV 674