Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  211 bits (536), Expect = 7e-59
 Identities = 169/567 (29%), Positives = 268/567 (47%), Gaps = 56/567 (9%)

Query: 2   FLKNLSIGKKIAASFSVIAVISLGFAIYLI-------------SELDKIQSELLNYTDDT 48
           FLK + I  KI   F +  + +L F IYL+              ++ K+Q   L  +  T
Sbjct: 3   FLKKMPIATKI---FLIPGIAALSFIIYLLITVYTALNNGATLEKVQKVQFPALQLSAST 59

Query: 49  LPAMENVDAIKDKMSYWRRTQFAVLPMKDEAQIRQTIERNNRVQAEINDSLVAYGKTVWP 108
           L  M+ V          R T  + +   DE  +    E     ++ +N        ++ P
Sbjct: 60  LVDMQKV----------RDTLASAVTTGDEDTLTMAQELAEEAKSGLNQIA-----SISP 104

Query: 109 GEEEQTFKRLMGNWNAYTAVTDQFNQTLLTQGADDAYPILANSLSTFEA-LESDFTLLIG 167
            E      R+   ++ Y  V    +Q+++   AD       + L    A +   +   I 
Sbjct: 105 -EFRSEISRISSGFDNYFDVAYDVSQSMVNGTAD------FSRLGELSAQMNQSYDGAIA 157

Query: 168 ILHQAMDSNKVQILSSVKTLNS--TSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSN 225
            + Q  D+ +     + K  +S  TS+ S   ILA++V +    T +   P+   +KQS 
Sbjct: 158 AMSQFRDAQQAAFEEAFKNTDSANTSLISTGVILAVVVTILLFGTAV---PIVRGIKQSI 214

Query: 226 ----------AIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLS 275
                     A   GDL+  ++  S   DE+G L     Q    L+ ++ +++ A   LS
Sbjct: 215 DDVVRSLKDIAQENGDLTVRIETKS--EDEIGELVYWFNQFMDKLQGVVRDVVEASLPLS 272

Query: 276 SAVEEMTQISNQSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQ 335
           +  + +  ++ ++   +  QQ   T    A+  M  +V  VA +   +AS A  A   ++
Sbjct: 273 NLAQNLRGVTEETQRTIDVQQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAR 332

Query: 336 EGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAI 395
           EG +     V SIQQ+A+ + E    ++ LE  S+++  V+DVI+ IA+QTNLLALNAAI
Sbjct: 333 EGRQIVQQTVTSIQQLAENVRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAI 392

Query: 396 EAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDK 455
           EAARAGE GRGFAVVADEVRTLA RTQ ST EI + IE+LQ  A  A +   R       
Sbjct: 393 EAARAGEQGRGFAVVADEVRTLASRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGTEQATS 452

Query: 456 CVEQGNHSQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQG 515
            VE  N + S + +I  +I  I  +  QIA    +Q +VA ++ R+V+ IH  +++ A  
Sbjct: 453 SVETANKAGSSLETITSTIGRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASR 512

Query: 516 SQQTAQACRELTQLAVSLQDTLRRFKI 542
           S +    C EL  LA  L+   ++F++
Sbjct: 513 SGELGSMCNELADLAQHLESIAKQFRV 539