Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  209 bits (532), Expect = 2e-58
 Identities = 115/321 (35%), Positives = 179/321 (55%), Gaps = 16/321 (4%)

Query: 206 VGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASM 265
           +G S+  + + +   KLA    P+ I GE+G GKE++A+  H +  R+S PF+ ++C ++
Sbjct: 141 IGDSSAMQQVRATIAKLARNQAPVYIAGESGVGKELVARLIHEQGPRASGPFVPVNCGAI 200

Query: 266 PDDVAETELFGHAPGSFNHQQGHK-GIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGT 324
           P ++ E+E FGH  GSF      K G+F+ A GGT+FLDE+ E+  H+Q+KLLR +Q+  
Sbjct: 201 PSELMESEFFGHRKGSFTGASTDKEGLFQAAQGGTLFLDEVAELPLHMQVKLLRAIQEKA 260

Query: 325 FRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQP 384
            R +G   EI VD R++++T  NL  L E  +FR+DLFYR+NV+ LR+PPLRER  DV  
Sbjct: 261 VRPIGGRDEIPVDARILSATHKNLGQLVEQGQFRQDLFYRINVIELRVPPLRERRGDVSQ 320

Query: 385 LLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVL---- 440
           L    +     K G    +L+      L  Y +PGN+R+L+N++ RA+   +G  +    
Sbjct: 321 LSAFILKALAGKSGESVGQLSPSARGALEAYDFPGNVRELENILERAMAMCDGSTIEAAD 380

Query: 441 ------GIEPFHLPQVDSVSSAP----SINLDGSLDDIMKEYE-SQVLDRLFQSFPSSRK 489
                    P H P      SAP    S   DG LDD +   E + ++  L +S  +   
Sbjct: 381 LMLPQRSARPSHEPAAPGQPSAPAAAASTGADGGLDDYISNLERTAIVKALEESRYNKTA 440

Query: 490 LAKRLNVSHTSIANKLRDYGI 510
            A++L ++  ++  KL+  GI
Sbjct: 441 AARKLGITFRALRYKLKKLGI 461