Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  211 bits (536), Expect = 6e-59
 Identities = 123/316 (38%), Positives = 184/316 (58%), Gaps = 18/316 (5%)

Query: 213 KSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAET 272
           + L  + +K+A  D  +LI+GE+GTGKE++A+A HN S R+ AP + ++CA++P+ + E+
Sbjct: 155 QDLYGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSKRAKAPMISVNCAAIPESLIES 214

Query: 273 ELFGHAPGSFNHQQ-GHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEE 331
           ELFGH  G+F     G  G+ E A+GGT+FLDEIGE+    Q +LLR LQ+G  RRVG  
Sbjct: 215 ELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSV 274

Query: 332 HEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFIT 391
               VDVR+IA+T  +L  LA+  +FREDL+YRL+V+ L++P LRER +DV  +   F+ 
Sbjct: 275 QSQKVDVRLIAATHRDLKSLAKIGQFREDLYYRLHVIALKLPALRERGADVNEIAHAFLL 334

Query: 392 KHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRAL-----TEIEGDVLG--IEP 444
           +   ++     K   D    +  Y WPGN+R+L+N V RA+      EI  ++LG  IE 
Sbjct: 335 RQSARINRTDLKFAPDAEQAIRHYSWPGNVRELENAVERAVILSESPEISAELLGIDIEL 394

Query: 445 FHLPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQSF-------PSSRKLAKRLNVS 497
             L   D +  APS    G  +   +  E   L+  FQ F        +  +LA++L VS
Sbjct: 395 SDLEDDDFIGLAPS---QGGSNTSHEPTEDLSLEDYFQHFVLEHQDHMTETELARKLGVS 451

Query: 498 HTSIANKLRDYGIRKR 513
              +  + +  GI +R
Sbjct: 452 RKCLWERRQRLGIPRR 467