Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  345 bits (886), Expect = 2e-99
 Identities = 201/517 (38%), Positives = 316/517 (61%), Gaps = 26/517 (5%)

Query: 1   MRLEVLCEDRLGLTRELLDILASKSIDLRGIEIDVIGIIYLNCPDIDFETFSELMAEIRR 60
           MR+ V   DR+G+T+E+L +L  ++++L  +E+ V   +Y++ P +  +   EL   +  
Sbjct: 1   MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEM-VPPNVYIDAPTLSADVLEELRDALFS 59

Query: 61  IPGVKDVRKIQFMPIERHNTELISLLNNLPDAVLAINLKGAVDMANHAAAALFNREESSM 120
           + GV+ V+ +  +P +R + +L +LL  + D VLA++  G + +AN A  AL+ RE +  
Sbjct: 60  VQGVQAVKVVDILPGQRRHLQLDALLAAMTDPVLALDSAGKILLANPALIALYGREPA-- 117

Query: 121 IGQQISALM--PVFNFTRWLEGSKSRLREDVVLDGLDYVMEIMPVYISSDAKQSTLASAM 178
            G+ IS L   P    T   +G +  LRE + ++G   +++  P+         T A A+
Sbjct: 118 -GESISELFNDPALLDTLLEQGFRLPLRE-ISVNGQTLLLDATPI---------TDAGAL 166

Query: 179 MMLRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTG 238
           + L   N      + +      GF+  +G S   ++L ++A+++A LD PLLI+GETGTG
Sbjct: 167 LTLYQPNRIGEQLSALHHDHAEGFDALLGESPVIRTLKARAQRVAALDAPLLIQGETGTG 226

Query: 239 KEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQQ--GHKGIFEQAN 296
           KE++A+ACH  S R SAPFL L+CA++P+++AE+ELFG+APG+F   Q  G  G+ E AN
Sbjct: 227 KELVARACHAISARHSAPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLMELAN 286

Query: 297 GGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRR 356
            GTVFLDEIGEMSP+LQ KLLRFL DG+FRRVG + E+ V+VR++++T  +L  +     
Sbjct: 287 QGTVFLDEIGEMSPYLQAKLLRFLNDGSFRRVGGDREVKVNVRILSATHRDLEKMVSEGT 346

Query: 357 FREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQ 416
           FREDLFYRLNVL + +PPLRER  D+  L   F+ + C ++     +L       L   +
Sbjct: 347 FREDLFYRLNVLNVEVPPLRERGQDILLLARYFMQQACAQIQRPVCRLAPGTYPALLGNR 406

Query: 417 WPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSVSSAPSINLDGSLDDI---MKEYE 473
           WPGN+RQL N++ RA    E  ++ I       +D   ++ +   DG +D +   ++++E
Sbjct: 407 WPGNVRQLQNVIFRAAAICESSLVDI-----GDLDIAGTSVARQSDGEIDSLEQAVEDFE 461

Query: 474 SQVLDRLFQSFPSSRKLAKRLNVSHTSIANKLRDYGI 510
             +L+ L+ S+PS+R+LA RL  SHT+IA++LR YGI
Sbjct: 462 RNLLETLYTSYPSTRQLASRLQTSHTAIAHRLRKYGI 498