Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  209 bits (533), Expect = 1e-58
 Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 14/310 (4%)

Query: 215 LMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETEL 274
           L+  A ++A  D  +LI GE+GTGKE+LA+  H +S R+  PF+ ++CA++PD++ E  L
Sbjct: 140 LLELAARVARSDSTVLISGESGTGKEVLARYIHQQSTRAKQPFIAINCAAIPDNMLEATL 199

Query: 275 FGHAPGSFNHQ-QGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHE 333
           FGH  GSF        G FEQA+GGT+ LDEI EM   LQ KLLR LQ+    RVG    
Sbjct: 200 FGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKP 259

Query: 334 IHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKH 393
           I +D+RV+A+T  +LA    + RFREDLFYRL+V  L   PLRERP+D+ PL E  +  H
Sbjct: 260 IQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRPLRERPADIIPLAERLLNNH 319

Query: 394 CNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSV 453
             K+   +  L+ +    L  Y WPGN+R+LDN + RAL   +G ++  + F L      
Sbjct: 320 VKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQRALILQQGGLIQPQDFCLAMGSGA 379

Query: 454 SSAPSI---------NLDGSLDDIMKEYESQ-VLDRLFQSFPSSRKLAKRLNVSHTSIAN 503
           +  P++            G+L D ++  E Q ++D L       ++ A+RL +S  ++  
Sbjct: 380 APLPTLAPTPVVVEAETAGALGDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRY 439

Query: 504 KL---RDYGI 510
           KL   RD G+
Sbjct: 440 KLAQMRDAGM 449