Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., sigma-54 dependent DNA-binding response regulator from Sphingobium sp. HT1-2

 Score =  209 bits (531), Expect = 2e-58
 Identities = 112/256 (43%), Positives = 156/256 (60%), Gaps = 3/256 (1%)

Query: 196 LQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSA 255
           + + L FE  VG + + ++ ++ A K A    P+LIEGE+G GK+++A+A H  S R   
Sbjct: 140 ISAPLAFEDVVGAAPQFRTALAIAAKAARARVPVLIEGESGVGKDVVARAIHAASPRHKQ 199

Query: 256 PFLVLSCASMPDDVAETELFGHAPGSFNHQ-QGHKGIFEQANGGTVFLDEIGEMSPHLQI 314
             + ++C ++P ++ E+ELFGH  G+F      H G F  A+ GT+FLDE+ EM    Q+
Sbjct: 200 AMVTVNCGAIPANLVESELFGHERGAFTGAFDRHVGKFLSADMGTIFLDEVSEMPLDAQV 259

Query: 315 KLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPP 374
           KLLR LQDG  + +G    +HVDVRVIA+T   L+D  E+ RFREDL+YRLNV+ L +PP
Sbjct: 260 KLLRVLQDGEVQPIGARRPVHVDVRVIAATNKKLSDEIEAGRFREDLYYRLNVVQLTVPP 319

Query: 375 LRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTE 434
           LRER  D+  L    + +   + G+    LTDD L  L Q+ WPGN+RQL N + RA   
Sbjct: 320 LRERMGDIPALCRHLLARIATQPGLRGLGLTDDALALLMQHDWPGNVRQLQNALFRAAVL 379

Query: 435 IEGDVLGIEPFHLPQV 450
            EGD L   P   PQV
Sbjct: 380 CEGDAL--TPHDFPQV 393