Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  213 bits (542), Expect = 1e-59
 Identities = 129/365 (35%), Positives = 213/365 (58%), Gaps = 19/365 (5%)

Query: 165 ISSDAKQSTLASAMMMLRAANAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAM 224
           I  D + +  A+     RA+N   T++ +    +  G    +G     + + S+ +K+A 
Sbjct: 112 ILRDRQNAPAAAPPAEPRASNGKATASDKGSAATANGEIGIIGSCQPMQDMYSKIRKVAP 171

Query: 225 LDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNH 284
            D  +LI+GE+GTGKE++A+A HN S R+ AP + ++CA++P+ + E+ELFGH  G+F  
Sbjct: 172 TDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTG 231

Query: 285 QQ-GHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIAS 343
              G  G+ E A+GGT+FLDEIGE+    Q +LLR LQ+G  RRVG      VDVR+IA+
Sbjct: 232 ASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAA 291

Query: 344 TRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPK 403
           T  +L +LA++ +FREDL+YRL+V+ L++P LRER SDV  +  +F+ +   ++G     
Sbjct: 292 THRDLKNLAKAGQFREDLYYRLHVIALKLPALRERGSDVNEIANVFLARQSARIGRDDLH 351

Query: 404 LTDDLLDKLSQYQWPGNMRQLDNMVLRAL-----TEIEGDVLGIEPFHLPQVDS------ 452
            + +    +  Y WPGN+R+L+N V RA+      EI  ++LGI+   L  +D       
Sbjct: 352 FSAEAEQAIRHYSWPGNVRELENAVERAVILSESAEISAELLGID-IELSDLDEDDILDN 410

Query: 453 ---VSSAPSINLDGSLDDIMKEY-ESQVLDRLFQSFPSSRKLAKRLNVSHTSIANKLRDY 508
              V++A + + + + D  +++Y +  VL+   Q   +  +LA++L VS   +  + +  
Sbjct: 411 ALVVANAGNASHEPTEDLSLEDYFQHFVLEH--QDHMTETELARKLGVSRKCLWERRQRL 468

Query: 509 GIRKR 513
           GI +R
Sbjct: 469 GIPRR 473