Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  207 bits (526), Expect = 8e-58
 Identities = 126/319 (39%), Positives = 180/319 (56%), Gaps = 10/319 (3%)

Query: 201 GFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVL 260
           G E  V      + L+  A ++A  D  +LI GE+GTGKE+LA+  H +S R++ PF+ +
Sbjct: 124 GEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQPFVAI 183

Query: 261 SCASMPDDVAETELFGHAPGSFNHQ-QGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRF 319
           +CA++PD++ E  LFGH  G+F        G FEQA GGT+ LDEI EM   LQ KLLR 
Sbjct: 184 NCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKLLRV 243

Query: 320 LQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERP 379
           LQ+    RVG    I +D+RV+A+T  +LA    + RFREDL+YRL+V  L   PLRERP
Sbjct: 244 LQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLRERP 303

Query: 380 SDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDV 439
            D+  L E  + +H  K+     +L+      L  Y WPGN+R+LDN + RAL   +G V
Sbjct: 304 GDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALILQQGGV 363

Query: 440 LGIEPFHLPQVDSVSSAPSINLD-----GSLDDIMKEYESQ-VLDRLFQSFPSSRKLAKR 493
           +    F L     +S+    +L+     G L D M+ +E Q ++D L       ++ A+R
Sbjct: 364 IEAADFCLAGAIPLSAGTEPSLEVVADAGGLGDDMRRHEYQMIIDTLRAERGRRKEAAER 423

Query: 494 LNVSHTSIANKL---RDYG 509
           L +S  ++  KL   RD G
Sbjct: 424 LGISPRTLRYKLAQMRDAG 442