Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., Formate hydrogenlyase transcriptional activator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  205 bits (521), Expect = 5e-57
 Identities = 117/316 (37%), Positives = 184/316 (58%), Gaps = 10/316 (3%)

Query: 202 FEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLS 261
           F   +G S    +++ Q + +A  D  +LI GETGTGKE++A+A HN S RS    + ++
Sbjct: 373 FGEIIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMN 432

Query: 262 CASMPDDVAETELFGHAPGSFNHQQGHK-GIFEQANGGTVFLDEIGEMSPHLQIKLLRFL 320
           CA+MP  + E++LFGH  G+F      + G FE A+  ++FLDE+G+M   LQ KLLR L
Sbjct: 433 CAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVL 492

Query: 321 QDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPS 380
           Q+  F R+G    I  DVR+IA+T  +L  +   R FR DL+YRLNV  +++PPLRERP 
Sbjct: 493 QEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYYRLNVFPIQLPPLRERPE 552

Query: 381 DVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVL 440
           D+  L++ F  K   ++G     +  + L  LS  +WPGN+R+L+N+V RA+    G+VL
Sbjct: 553 DIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRELENVVERAVLLTRGNVL 612

Query: 441 GIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQS----FPSSRKLAKRLNV 496
            +    LP + +V+  P  +   +  D   E E Q++ R+ +         +  A+RL +
Sbjct: 613 QLS---LPDITAVT--PDTSPVATESDKEGEDEYQLIIRVLKETNGVVAGPKGAAQRLGL 667

Query: 497 SHTSIANKLRDYGIRK 512
             T++ ++++  GI K
Sbjct: 668 KRTTLLSRMKRLGIDK 683