Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score =  205 bits (522), Expect = 4e-57
 Identities = 117/318 (36%), Positives = 184/318 (57%), Gaps = 14/318 (4%)

Query: 202 FEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLS 261
           F   +G S    S++ Q + +A  D  +LI GETGTGKE++A+A HN S R++   + ++
Sbjct: 378 FGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMN 437

Query: 262 CASMPDDVAETELFGHAPGSFNHQQGHK-GIFEQANGGTVFLDEIGEMSPHLQIKLLRFL 320
           CA+MP  + E++LFGH  G+F      + G FE A+  ++FLDE+G+M   LQ KLLR L
Sbjct: 438 CAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVL 497

Query: 321 QDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPS 380
           Q+  F R+G    I  DVR+IA+T  +L  +   R FR DL+YRLNV  + +PPLRERP 
Sbjct: 498 QEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPE 557

Query: 381 DVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDV- 439
           D+  L + F  K   +LG     +  + L  LS  +WPGN+R+L+N++ RA+    G+V 
Sbjct: 558 DIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVL 617

Query: 440 -LGIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQS----FPSSRKLAKRL 494
            L +    LP+ ++  +A  + L+G       E E Q++ R+ +         +  A+RL
Sbjct: 618 QLSLPDIVLPEPETPPAATVVALEG-------EDEYQLIVRVLKETNGVVAGPKGAAQRL 670

Query: 495 NVSHTSIANKLRDYGIRK 512
            +  T++ ++++  GI K
Sbjct: 671 GLKRTTLLSRMKRLGIDK 688