Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Enterobacter asburiae PDN3

 Score =  204 bits (519), Expect = 8e-57
 Identities = 116/316 (36%), Positives = 184/316 (58%), Gaps = 12/316 (3%)

Query: 202 FEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLS 261
           F   +G S+   S++ Q + +A  D  +LI GETGTGKE++A+A HN S+R+S   + ++
Sbjct: 378 FGEIIGRSDAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSNRNSRRMVKMN 437

Query: 262 CASMPDDVAETELFGHAPGSFNHQQGHK-GIFEQANGGTVFLDEIGEMSPHLQIKLLRFL 320
           CA+MP  + E++LFGH  G+F      + G FE A+  ++FLDE+G+M   LQ KLLR L
Sbjct: 438 CAAMPAGLLESDLFGHERGAFTGASSQRLGRFELADKSSLFLDEVGDMPLELQPKLLRVL 497

Query: 321 QDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPS 380
           Q+  F R+G    I  DVR+IA+T  +L  +   R FR DL+YRLNV  + +PPLRERP 
Sbjct: 498 QEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIFLPPLRERPE 557

Query: 381 DVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVL 440
           D+  L++ F  K   ++G     +  + L  LS  +WPGN+R+L+N++ RA+    G+VL
Sbjct: 558 DIPLLVKAFTAKIARRMGRNIDSIPAETLRTLSSMEWPGNVRELENVIERAVLLTRGNVL 617

Query: 441 GIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQS----FPSSRKLAKRLNV 496
            +    LP+V    + P +    +      E E Q++ R+ +         +  A+RL +
Sbjct: 618 QLS---LPEV----TLPDVTAPAAETAKEGEDEYQLIMRVLKETNGVVAGPKGAAQRLGL 670

Query: 497 SHTSIANKLRDYGIRK 512
             T++ ++++  GI K
Sbjct: 671 KRTTLLSRMKRLGIDK 686