Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., nif-specific transcriptional activator NifA from Dickeya dianthicola ME23

 Score =  206 bits (523), Expect = 2e-57
 Identities = 116/313 (37%), Positives = 189/313 (60%), Gaps = 9/313 (2%)

Query: 201 GFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVL 260
           GF+  VG S   +  +   ++++  D  +L+ GE+GTGKE++A A H+ S R++APF+  
Sbjct: 205 GFDSMVGTSAAMRQTLEIVRQVSRWDTTVLVRGESGTGKELVANAIHHNSPRAAAPFVKF 264

Query: 261 SCASMPDDVAETELFGHAPGSFNHQ-QGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRF 319
           +CA++PD++ E+ELFGH  G+F    +  KG FE A+GGT+FLDEIGE S   Q KLLR 
Sbjct: 265 NCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRI 324

Query: 320 LQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERP 379
           LQ+G   RVG +  + V+VR+IA+T  +L +   +  FREDL+YRLNV+ + +PPLRER 
Sbjct: 325 LQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRAGHFREDLYYRLNVMPVSLPPLRERQ 384

Query: 380 SDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRA--LTE--- 434
            D+  L +  + K     G    +++D  +  L  Y WPGN+R+L+N + RA  +T+   
Sbjct: 385 EDIVELAQFLVKKIAAHQGRTL-RISDGAIRLLMGYNWPGNVRELENCLERAAVMTDTGL 443

Query: 435 IEGDVLGIEPFH-LPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQSFPSSRKLAKR 493
           I+ DV+        P ++  +S P++  +G LD  + E   +++  L ++     K A+ 
Sbjct: 444 IDRDVILFNHHDAAPMMNKTTSPPAVAEEGWLDQNLDE-RQRLIAALEKTGWVQAKAARL 502

Query: 494 LNVSHTSIANKLR 506
           L ++   +A +++
Sbjct: 503 LGMTPRQVAYRIQ 515