Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., sigma-54-dependent Fis family transcriptional regulator from Bacteroides stercoris CC31F

 Score =  204 bits (520), Expect = 4e-57
 Identities = 114/311 (36%), Positives = 183/311 (58%), Gaps = 4/311 (1%)

Query: 202 FEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETGTGKEMLAKACHNRSDRSSAPFLVLS 261
           F+  +G S   K  +S A+K++  D P+L+ GETGTGKE+ A+A H  S R+   F+ ++
Sbjct: 139 FDSVLGDSKALKDAVSLAQKVSGTDVPVLLTGETGTGKEVFAQAIHYNSKRAKQNFVAVN 198

Query: 262 CASMPDDVAETELFGHAPGSFNHQ-QGHKGIFEQANGGTVFLDEIGEMSPHLQIKLLRFL 320
           C+S   ++ E+E+FGH  GSF    +  KG+FE+A+ GT+FLDEIGEM+  LQ KLLR L
Sbjct: 199 CSSFSKELLESEMFGHKAGSFTGALKDKKGLFEEADNGTIFLDEIGEMAFELQAKLLRIL 258

Query: 321 QDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRRFREDLFYRLNVLTLRIPPLRERPS 380
           + G + ++G+     V+VRV+A+T  NL +   + RFREDLFYRL+V  + +PPLRER  
Sbjct: 259 ETGEYIKIGDTKPTRVNVRVVAATNRNLPEEITAGRFREDLFYRLSVFQIHLPPLRERAG 318

Query: 381 DVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQWPGNMRQLDNMVLRALTEIEGDVL 440
           DV+ L + F+     +L     ++T   L+ L Q  W GN+R+L N++ R+L   E + L
Sbjct: 319 DVRILAKAFVKDFSVRLARPVTEITPAFLEALEQQPWKGNIRELRNVIERSLIVCESERL 378

Query: 441 GIEPFHLPQVDSVSSAPSINLDGSLDDIMKEYESQVLDRLFQSFPSSR-KLAKRLNVSHT 499
            +    L   ++          GS +  +   E + + R+ +    ++ + A+ L +  T
Sbjct: 379 DVADLPLDIQNTHYEQSDETTPGSFE--LSAMERRHIARVLEYTKGNKTEAARLLKIGLT 436

Query: 500 SIANKLRDYGI 510
           ++  K+ +YGI
Sbjct: 437 TLYRKIEEYGI 447