Pairwise Alignments

Query, 513 a.a., transcriptional regulator TyrR from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Transcriptional regulatory protein TyrR from Alteromonas macleodii MIT1002

 Score =  454 bits (1168), Expect = e-132
 Identities = 244/521 (46%), Positives = 338/521 (64%), Gaps = 17/521 (3%)

Query: 1   MRLEVLCEDRLGLTRELLDILASKSIDLRGIEIDVIGIIYLNCPDIDFETFSELMAEIRR 60
           MRLE+ C+DRLG+T+++LDIL +K IDLRGIEID  G I+LN P+I+F  F  LM +IRR
Sbjct: 1   MRLEISCQDRLGITQDVLDILVTKEIDLRGIEIDPAGKIFLNFPNIEFADFQHLMPQIRR 60

Query: 61  IPGVKDVRKIQFMPIERHNTELISLLNNLPDAVLAINLKGAVDMANHAAAALFNREESSM 120
           I G+ DV+   FMP ER   +L ++L  LPD V +I+ KG + + N A  A      S +
Sbjct: 61  IDGIDDVKTTLFMPGEREKNQLSAILRTLPDPVFSIDAKGNILLCNEAVCAGLEIPSSEI 120

Query: 121 IGQQISALMPVFNFTRWLEG-SKSRLREDVVLDGLDYVMEIMPVYISSDAKQSTLASAMM 179
            G +I  ++  FNFT+W++G S       V     DY+ +++P+ +    +   +A A++
Sbjct: 121 EGIEIGEVVKGFNFTKWMDGKSPGPQSSKVKFIQQDYLADMLPITVPDGEQNMIMAGAVV 180

Query: 180 MLRAA---NAGLTSTTQIPLQSNLGFEHFVGVSNRHKSLMSQAKKLAMLDQPLLIEGETG 236
           +L++        T+  Q P  S   F+ FV  S   K ++ +AK++A LD P+LI GETG
Sbjct: 181 ILKSEMRLGQQFTAFHQSPTDS---FDRFVTQSPFMKRVVHEAKRIADLDAPILIFGETG 237

Query: 237 TGKEMLAKACHNRSDRSSAPFLVLSCASMPDDVAETELFGHAPGSFNHQQGHKGIFEQAN 296
           TGKEM+A+ACH  S RS   FL L+CAS+PD VAETELFG+A G+FN      G+ EQA 
Sbjct: 238 TGKEMIARACHQSSRRSEGAFLALNCASLPDSVAETELFGYAAGAFNQPNAKVGLLEQAK 297

Query: 297 GGTVFLDEIGEMSPHLQIKLLRFLQDGTFRRVGEEHEIHVDVRVIASTRHNLADLAESRR 356
           GGT+ LDEI +MS  LQ KLLR L+DG FRRVG+   + VDVR I +T  +L  L E  R
Sbjct: 298 GGTLLLDEIADMSSQLQAKLLRVLEDGEFRRVGDSEPVKVDVRFICTTCRDLGQLVEEGR 357

Query: 357 FREDLFYRLNVLTLRIPPLRERPSDVQPLLELFITKHCNKLGMLKPKLTDDLLDKLSQYQ 416
           FR++L+YRLNVL+L +P L++R  D+ PL E FI +H  KLG    KL+   +D L QY 
Sbjct: 358 FRKELYYRLNVLSLVMPSLKDRRQDIVPLAESFIVQHSTKLGRRPAKLSKSCVDFLQQYP 417

Query: 417 WPGNMRQLDNMVLRALTEIEGDVLGIEPFHLPQVDSVSSAPSI-----NLDGSLDDIMKE 471
           WPGN+RQL N + RAL+ ++G  +  E   LP     S APS+     N DG+LD+ +K+
Sbjct: 418 WPGNVRQLQNALYRALSLLDGKEITKEDIQLP-----SCAPSVTYIDENFDGTLDEEVKK 472

Query: 472 YESQVLDRLFQSFPSSRKLAKRLNVSHTSIANKLRDYGIRK 512
           +E  +L RL+ S+PS+R+LAK+L +SHT+IANKLR+YGI K
Sbjct: 473 FEKDLLKRLYPSYPSTRQLAKKLGLSHTAIANKLREYGINK 513