Pairwise Alignments

Query, 505 a.a., fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., anaerobic class I fumarate hydratase (fumarase B) from Escherichia coli BL21

 Score =  198 bits (503), Expect = 5e-55
 Identities = 149/470 (31%), Positives = 225/470 (47%), Gaps = 29/470 (6%)

Query: 39  EESQAAKDSIAQILINSRMSAEGHRPICQDTGIVTCFVNIGMGVQWDSTDMTVQQMVDEG 98
           E S+  K    Q L NS ++A+G  P CQDTG        G  V     D   ++ + +G
Sbjct: 78  EASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIVGKKGQRVWTGGGD---EEALSKG 134

Query: 99  VRQAYTNPDNPLRASVLMDPAGKRINTKDNTPAVVHINMVPGDKVDIQIAAKGGGSENKT 158
           V   Y   +     +  +D   K +NT  N PA + +  V GD+      AKGGGS NKT
Sbjct: 135 VYNTYIEDNLRYSQNAALDMY-KEVNTGTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKT 193

Query: 159 KM-----VMLNPSDDIAEWVEKTVPLMGAGWCPPGMLGIGIGGT-AEKAAVLAKEALMEH 212
            +      +L P   +  ++ + +  +G   CPP  +   IGGT AE      K A   +
Sbjct: 194 YLYQETKALLTPGK-LKNFLVEKMRTLGTAACPPYHIAFVIGGTSAETNLKTVKLASAHY 252

Query: 213 IDI--HELIERGPQNAEEELRLDIFNRVNKLGIGAQGLGGLTTVVDVKIKSAPTHAASKP 270
            D    E  E G    + +L  ++     KLG+GAQ  GG     D+++   P H AS P
Sbjct: 253 YDELPTEGNEHGQAFRDVQLEQELLEEAQKLGLGAQ-FGGKYFAHDIRVIRLPRHGASCP 311

Query: 271 VCMIPNCAATRHVHFTLDGSGPAQLTPPKLED-----WPQITWEAGANTR-RVNLDNITR 324
           V M  +C+A R++   ++  G   +   KLE       PQ   +AG     +V+L+   +
Sbjct: 312 VGMGVSCSADRNIKAKINREG---IWIEKLEHNPDQYIPQELRQAGEGEAVKVDLNRPMK 368

Query: 325 E---EIQTWKTGETVLLSGKILTGRDAAHKRIQTMLQKGEKLPDSVDLKDKFIYYVGPVD 381
           E   ++  +     + L+G I+ GRD AH +++ ++  G++LP  +  KD  IYY GP  
Sbjct: 369 EILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYI--KDHPIYYAGPAK 426

Query: 382 AVGDEVVGPAGPTTSTRMDKFTDMMLEEVGVMGMIGKAERGPATVESIKKHKAVYLMAVG 441
                  G  GPTT+ RMD + D++    G M M+ K  R     ++  KH   YL ++G
Sbjct: 427 TPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGFYLGSIG 486

Query: 442 G-AAYLVAKAIKKARVVAFEDLGMEAIYEFEVEDMPVTVAVDSTGANAHQ 490
           G AA L  ++IK    VA+ +LGMEAI++ EVED P  + VD  G +  Q
Sbjct: 487 GPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQ 536