Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., predicted serine transporter (NCBI) from Escherichia coli BW25113

 Score =  429 bits (1104), Expect = e-125
 Identities = 221/424 (52%), Positives = 302/424 (71%), Gaps = 16/424 (3%)

Query: 3   TTTAATSTARSASKWTYKDFTWALSLFGTAVGAGVLFLPIKAGAGGFWPLVLLALIAAPM 62
           T+T A+  +RSA  W   D  W L L+GTA+GAGVLFLPI AG GG  PL+++A++A PM
Sbjct: 6   TSTIASKDSRSA--WRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPM 63

Query: 63  TWFAHKSLARFVLSAKNPDADITDTVEEHFGKAGANLITFAYFFAIYPIVLIYGVGITNT 122
           T+FAH+ L RFVLS KNP  DIT+ VEEHFG     LIT  YFFAIYPI+L+Y V ITNT
Sbjct: 64  TFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNT 123

Query: 123 VDSFLVNQIGMESIPRWLLSGALITAMTAGVVFGKELMLKATSAMVYPLVFILLALSFYL 182
           V+SF+ +Q+GM   PR +LS  LI  M   V FG+++++KA S +V+P V +L+ L+ YL
Sbjct: 124 VESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYL 183

Query: 183 IPDWNTSMME------VAPDWSAMPAIVWLAIPIIVFSFNHSPIISQFSKEQRQQFGDKA 236
           IP WN + +E       +   + +   +WLAIP++VFSFNHSPIIS F+  +R+++GD A
Sbjct: 184 IPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMA 243

Query: 237 VQKTDMITGGAAMMLMGFVMFFVFSVVLSLSPAELAMAKEQNISVLSYLANEHASPIISY 296
            QK   I   A +M++  VMFFVFS VLSL+PA+LA AKEQNIS+LSYLAN   +P+I++
Sbjct: 244 EQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAW 303

Query: 297 LGPIVAFAAITSSYFGHFLGAHEGLVGLV------KSRSNMQVSKIEKISLGFIVITTWI 350
           + PI+A  AIT S+ GH+LGA EG  G+V      K +S ++++K+ +I+  F+++TTWI
Sbjct: 304 MAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKS-IEINKLNRITALFMLVTTWI 362

Query: 351 VAIVNPSILGMIETMGAPMIAAILFLLPVFAMHKVPAMAKFKTSAPVQIFTVICGLAAIS 410
           VA +NPSILGMIET+G P+IA ILFL+P++A+ KVPAM K+       +F V+ GL AIS
Sbjct: 363 VATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHIS-NVFVVVMGLIAIS 421

Query: 411 SVIY 414
           ++ Y
Sbjct: 422 AIFY 425