Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., threonine/serine transporter TdcC from Escherichia coli ECRC62

 Score =  346 bits (887), Expect = e-100
 Identities = 187/441 (42%), Positives = 273/441 (61%), Gaps = 28/441 (6%)

Query: 1   MNTTTAATSTARSASKWTYKDFTWALSLFGTAVGAGVLFLPIKAGAGGFWPLVLLALIAA 60
           M+T+ +  S+    S W   D TW L LFGTA+GAGVLF PI+AG GG  P++L+ ++A 
Sbjct: 1   MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAY 60

Query: 61  PMTWFAHKSLARFVLSAKNPDADITDTVEEHFGKAGANLITFAYFFAIYPIVLIYGVGIT 120
           P+ ++ H++LAR  LS  NP  +IT+TVEEHFGK G  +ITF YFFAI P++ IYGV IT
Sbjct: 61  PIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTIT 120

Query: 121 NTVDSFLVNQIGMESIPRWLLSGALITAMTAGVVFGKELMLKATSAMVYPLVFILLALSF 180
           NT  +F  NQ+G   + R  ++  L+  M   + FGK+LM+K  S +V+P +  L+ +S 
Sbjct: 121 NTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISL 180

Query: 181 YLIPDWNTSMMEVAPDWS-------AMPAIVWLAIPIIVFSFNHSPIISQFSKEQRQQF- 232
            LIP WN+++++     S        +   VWL I I+VFSFN SPI+S F   +R+++ 
Sbjct: 181 SLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYE 240

Query: 233 ----GDKAVQKTDMITGGAAMMLMGFVMFFVFSVVLSLSPAELAMAKEQNISVLSYLANE 288
                D   +K   I   A+M+++  VMFF FS + +LSPA +A AK QNI VLSYLAN 
Sbjct: 241 KDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANH 300

Query: 289 HASP---------IISYLGPIVAFAAITSSYFGHFLGAHEGLVGLV------KSRSNMQV 333
            AS           + Y   I+A  AI  S+FGH+LG  EGL GL+        ++ + +
Sbjct: 301 FASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSL 360

Query: 334 SKIEKISLGFIVITTWIVAIVNPSILGMIETMGAPMIAAILFLLPVFAMHKVPAMAKFKT 393
            K+  IS+ FI+ +TW+VA  NP+IL +IE MGAP+IA++L LLP++A+ K P++AK++ 
Sbjct: 361 GKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRG 420

Query: 394 SAPVQIFTVICGLAAISSVIY 414
                +F  + GL  I +++Y
Sbjct: 421 RLD-NVFVTVIGLLTILNIVY 440